Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIEK-------------------------VKSFLLPLNNLK-STHGTFYVPGNHEYYHGIEPILSF-L-N-TLDMTILGNECV-HLGGINLCGVYDYFARK-R-Q--------DFAPDIDKALKKRDSSKPTILLAHQPKQIR------------------SLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 2YVT Chain:A ((4-224)) | ----------------------------------------------------------------------------------------------------------------------------------------------MPRKVLAIKNFKERFD----LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL-KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHELVGNTIVVNPGEFEEGRYAFLDLTQHKIKLEQFS------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47848 for 1153 contacts (-41.5/contact) +
2D Compatibility (PS) -17019 + (NN) -3860 + (LL) 14140
1D Compatibility (HY) 4800 + (ID) 500
Total energy: -50287.0 ( -43.61 by residue)
QMean score : 0.304
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