Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGCSFIFKKVRVYSKMLVALGLSSVLIGCAMNPSAETKKPNDAKNQQPVQTHERMTTSSEHVTPLDFNYPVHIVQAPQNHHVVGILMPRIQVSDNLKPYIDKFQDALINQIQTIFEKRGYQVLRFQDEKALNVQDKKKIFSVLDLKGWVGILEDLKMNLKDPNSPNLDTLVDQSSGSVWFNFYEPESNRVVHDFAVEVGTFQAITYTYTSTNNASGGFNSSKSVIHENLDKNREDAIHKILNRMYAVVMKKAVTELTKENIAKYRDAIDRMKGFKSSMPQKK |
4QT4 Chain:A ((1-189)) | ------------MVKMIVGLG----------NPGSKYEK---TKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPT-----------------------TFMNNSGIAVKALLTYYNIDITD------------LIVIYDDLDMEV--------SKLRLRSKGS-------AGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKG-----MTVINHVMGQFNTEDNIAISLTLDRVV--NAVKFYLQEN--DFEKTMQKFNG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1009 for 1548 contacts (-0.7/contact) +
2D Compatibility (PS) -20412 + (NN) -7392 + (LL) 5740
1D Compatibility (HY) -11200 + (ID) 2050
Total energy: -36323.0 ( -23.46 by residue)
QMean score : 0.290
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