Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQN-K-DGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRIYASNNRNDKYKFIAQ----TTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTI-QDSSALIQWENNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 1TDQ Chain:A ((16-278)) | --------------------------------------------------------------------------------------------------------------------------------------------DGPTQILVRDVSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGKTTF-RL-QPPLSQYSVQALRPGSRYEVSISAVRGTN-ESDASS-TQFT--TEIDAPKNLRVGSRTATSLDLEWDNSE-AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQS-IP----ATMNARTELDSPRDLMVTASSETSISLIWTKAS-GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQ-QSLESTVDAF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4524 for 1819 contacts (2.5/contact) +
2D Compatibility (PS) -26996 + (NN) -3931 + (LL) 10108
1D Compatibility (HY) 2000 + (ID) 1850
Total energy: -16145.0 ( -8.88 by residue)
QMean score : 0.251
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