Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVDHLISPFRDKRIILALSNEIKKFASKLTKKLVIMEVCGGHTHSIMKYGLLDLMP-KNLEFAHGPGCPVCVMPRARLDEAYELA-SMKDSIVLSLGDMMRVPGSYGSLIQAREKGLDAR-FLYSP-MQA-LEIAKENPHKKVIYIAIGFETTTPMTASVLLNAKK-EKLKNLFFHINHILVPPSVSTILEDKACRINALLAPSHVSVISGAQIYAPLVD-RFKLPIIVSGFEPVDILESVLMLTKQAL-NKEAKLEIQYKRAVSYEGNT--KAQELVNACMEVRENFEWRGLGNIKRSALKLKEAFASYDAEKVFKAYLSHKTSKENKAC-KCGEILKGIAKPLDCSLFATTCTPQNPIGSCMVSSEGACAAYYRYKRV |
| 2GH1 Chain:A ((13-293)) | YLKNTRDLYYNDDYVSFLVNTVWK-----ITKPVHIVDYGCGY-------GYLGLVLMPLLP--EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICH-AFLLHMTTPETMLQKMIHSVKKG--GKIICFEPH-------------WISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNG----------------KDGNIGMKIPIYLSELGVKNIECRVSDKVNFLDSNMHHNDKNDLYQSLKEEGIAGDPGDKQQFVERLIA---------------RGLTYDNALAQYEAELRFFKALHLHSSLVYAPNMK------------------------------ITFGEIEC--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63641 for 2023 contacts (-31.5/contact) +
2D Compatibility (PS) -28731 + (NN) -2976 + (LL) 6864
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -95384.0 ( -47.15 by residue)
QMean score : 0.237
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