Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLGLSSLGGTLEFYDFIIFVFFTSIIAKHFFPNTLSPIWSEINTYGIFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAHYLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYLRRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISISMLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILGLVGIVSSIIFTGFLADKIKPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTIILYFLACFCAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA
3WDO Chain:A ((18-160))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFSLRMLGMFMVLPVLTTYGMAL--QGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAA-L--S--DSIWGIILGRALQGS-GAIAAAVMALLSDLTREQNRTKAMAFI-GVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVL


General information:
TITO was launched using:
RESULT:

Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136067 for 1028 contacts (-132.4/contact) +
2D Compatibility (PS) -13868 + (NN) 2573 + (LL) 19040
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -134522.0 ( -130.86 by residue)
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_3WDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WDO-query.scw
PDB file : Tito_Scwrl_3WDO.pdb: