Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQG--------DAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNI----------KVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQ-----------GSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 1ZKP Chain:A ((18-267)) | -------------------------LYFQSNAMKMTVVGFWGGFPEAGEATSGYLFEH-DGFRLLVDCGSGVL-AQLQK---YITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDEN--GFHSLT---HEPHTKGIPYNPEETLQIGPFSISFLKTVHPV-------TCFAMRITAGNDIVVYSADSSYIPE--FIPF--TKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTG--NPADLVTEAKQ--------IFSGHITLAHSGYVWN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74101 for 1920 contacts (-38.6/contact) +
2D Compatibility (PS) -23268 + (NN) 1295 + (LL) 3232
1D Compatibility (HY) -10400 + (ID) 1250
Total energy: -104492.0 ( -54.42 by residue)
QMean score : 0.478
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