Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDFMTLEKVREKGPLVHNITNIVVANDSANGLLAIGASPIMASAKEEMDELAKMADVLVINIGTLDGELVTAMKIAGRAANVAGTPVVLDPVGVGATSYRRKVVQELLAEIQFAAIRGNAGELAAIAGEAWEAKGVDAGV------GSADVLSIAGKVANEW-STVVIISGEVDVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFIAVQDDAFRASVEACASYAVASEYAEMELERKLPGSFRPLFLDALASWSVEKT-RAKAKIQESGEHK |
| 3DZV Chain:A ((8-272)) | ----FETIFPLTTAPLIQCITNEITCESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVH-NQPTVVKGNLSEMRTFCQLVSH-------PLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAKTK--SQGLADFRQNTLNQLSLLMKEKDWFEAVKGRV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134202 for 2216 contacts (-60.6/contact) +
2D Compatibility (PS) -26086 + (NN) -3490 + (LL) 916
1D Compatibility (HY) -10400 + (ID) 3100
Total energy: -176362.0 ( -79.59 by residue)
QMean score : 0.531
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