Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGLTELLKGSLEGMILERISRGETYGYEITKYLNDL-GFDEIVEGTVYTILVRLEKKGLVEIEKKK-SELGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQVKGGQA
2ZFW Chain:A ((40-134))
------LSKELAVCYVLAVLRHEDSYGTELIQHLETHWPNYRLSDTVLYTALKFLEDEQIISGYWKKVEGRGRPRRMYQLAQANDDRSRDLAQLWERYLSS---------
General information:
TITO was launched using:
RESULT:
Template:
2ZFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35663 for 617 contacts (-57.8/contact) +
2D Compatibility (PS) -9838 + (NN) -2554 + (LL) 1140
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -50365.0 ( -81.63 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2ZFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZFW-query.scw
PDB file :
Tito_Scwrl_2ZFW.pdb
: