Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------LHKLSVVIAVYNV-SEYIEACLTSVLEQNYKN--VELIIVNDGSTDDTF-QKVEKLVDGHTNVILI-DQENQGVSAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKMMDSFEMSDADMVTIGVARLSGDKVYPSTLHERYMVEKKEATTIEETPALLYDTTSWNKVFKKSFWDKHHLEFPEGQMYEDIALMIPAFLYAEKVNIIPDVGYY---WRSREGGAKSITQRRNDIAMVNDRLLALK--KVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK--------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2D7I Chain:A ((35-570)) | GQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDF-------RYETQAGD------AMRGAFD---WEMYYKRIPIPPELQKADPSDPFE--SPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFK---VWMCGGRMEDIPCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMD----EYAEYIYQRRPEYRHLSAGD---------VAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128800 for 2429 contacts (-53.0/contact) +
2D Compatibility (PS) -32326 + (NN) -6708 + (LL) 2460
1D Compatibility (HY) -12400 + (ID) 2400
Total energy: -180174.0 ( -74.18 by residue)
QMean score : 0.346
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