Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHI--KNQNVLDFGAGFCLTAQHLAKEN-NVTAIEPNPKLLYDNQSDNIYKILGSYEA-L-RDLPNQSFDTIICHNVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQSVIFSNDTSTAMELLTGEANFKSASFDQGNIYTLEELKQNT-NL-LVERYQGIRTFYSLQPNHF-KTETGWLNKMLAIELSVADKA-PYKDIAFLQHITLKKSL |
| 3CC8 Chain:A ((20-230)) | --------------------AVNPNLLKHIKKEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPY-EEEQFDCVIFGDVLEHL--FDPWAVIEKVKPYIKQN-----------GVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRF--FTFNEMLRMFLKAGYSISKVDRVYVDHKMYEPLIEELYGICKKYRLGSGFMAETVVFQYIIEAEKSQL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31042 for 1547 contacts (-20.1/contact) +
2D Compatibility (PS) -21270 + (NN) -2980 + (LL) 2688
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -61604.0 ( -39.82 by residue)
QMean score : 0.295
|
|
|