Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPKKIARINELSKK------------------KKTVGLTGEEKVEQAKLREEYIEGFR-----RSVRHHVEGIKLVDDEGN-DVTPEKLRQVQREKGLHGRSLDDPNS---------------- |
| 1FYH Chain:A ((1-125)) | MQDPYVKEAENLKKYFNAGHSDVADNGTLFLGILKNWKEESDRKIMQSQIVSFYFKLFKNFKDDQSIQKSVETIKEDMNVKFFNSNKKKRDDFEKLTNYSVTDLNVQRKAIDELIQVMAELGANV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23493 for 429 contacts (54.8/contact) +
2D Compatibility (PS) -9313 + (NN) -2828 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 750
Total energy: 7002.0 ( 16.32 by residue)
QMean score : 0.511
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