Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MQKFKERFDTLSD-------------AILAIAMTILVLEIKTPATMGDIGDFTRNIGLFIVSFV-----------VVFNFWYERAQNSLDAQKTNDEIIALDIIEHLGIC---------------LIPLFTKFMISFE---NHNFAVMAYGLLTLLV--GLTSDIIRIRLASYDLVT-----IPSELKERVIKVM--TTFAIRSVVV-----RFIIIILAYF-LPEV----GIFAYLVIPLFMFWRRSRAGK--YYAKKGIEAPSYIKLFIQIGERAPE-DFT--NSSSGIGGVKR-----LYKK----------------------- |
| 4TXD Chain:A ((21-369)) | KRDVLAELGLGDLRPYLRSIGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTI-NMTTLEYSGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKDLGFKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHNEKFGGLSIGIKTRVRFDPAFATQRRITPETHNKVTEGHLSMTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMVKWVEELKGGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166652 for 1544 contacts (-107.9/contact) +
2D Compatibility (PS) -24844 + (NN) -1451 + (LL) -172
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -203669.0 ( -131.91 by residue)
QMean score : 0.153
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