Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNRLENIISLVSQYQ-----KIDVNTLSELLQVSKVTIRKDLDKLEGKGLLHREHGYAVLNSGDDLNVRLSFNHKTKKEIAALAANMVSDNDTILIESGSTCALLAENICQTKRNVTILTNSCFIANYLREYDSCQIVLLGGEYQSSSQVTVGPLLKKMISLFHVSLAFVGTDGFDPKLGFMGRDLMRSEVAQEMANAADEVIILTDSSKFNQTALVEQLPLSTVSQVITDKHPNSEIANLFQEAEITIQSLLQVP |
| 2VT3 Chain:A ((11-209)) | ATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATIRRDFSYFGALG-------------------------YNVDYLLSFFRKTLDQDDVILIGVGNLGTAFLHY---NTKISMAFDIN---------------ESKIGTEVGGVPVYNLDDLEQHVKDESVAILTV-----------------PAVAAQSITDRLVALGI---KGILNFTPARLNVPEHIRIHHIDLAVELQSLVYFLKHYS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55911 for 1226 contacts (-45.6/contact) +
2D Compatibility (PS) -19180 + (NN) -3854 + (LL) 4372
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -79923.0 ( -65.19 by residue)
QMean score : 0.445
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