Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLG-----LAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAMEGDIILAEP-QALVGFAGRRVIETTVREDLP-EGFQKAEFL-LEHGFVDAIINRT-ELRDCIAQLIAFHGNEVGHE |
| 1VRG Chain:A ((17-264)) | ---------------------------------------DKIEELKKIEKEIEQGGGPEKVEKQHRAGKLTAWERLELLLDPGTFVEIDKFVEHRNTY-FG--LD------KVKLPRDGVITGVGEINGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGEIFLRNT-LASGVVPQITVIAGPCAGGAVY-SPALTDFIVMVDQTARMFITGPNVIKAVTGEEISQEDLGGAMVHNQKSGNAHFLADNDEKAMSLVRTLLSYLPSNNAEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121597 for 1986 contacts (-61.2/contact) +
2D Compatibility (PS) -26005 + (NN) -11853 + (LL) 2652
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -166803.0 ( -83.99 by residue)
QMean score : 0.386
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