Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKIIAVDLDGTLLHNNNTISDYTADTLRKVQAQGHKVIITTGRPYRMALAHY-LRLDLKTPMINFNGALTHIPEKKWAFERSATIDKKLLLETLNLSDAIQADFIASEYRKNFYITMDNRD--KINPQLFGV-------NE--------I-----TDKMALDV-TKI--TRNPNALLMQT-RHKDKYELAKELRQHFNHELEVDSWGGPLNILEFSPKGVNKAYALKHLLKSLNLSQENLIAFGDEHNDTEMLAFAHTGYAMKNANPTLLPYADQQIQWTNEEDGVAKTLEKLLL |
| 1NRW Chain:A ((4-288)) | --MKLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDV-MSIFEPLGIKTWVISANGAVIHDP-EGRLYH-HETIDKKRAYDILSWLESENYYYEVF-TGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYE-H-AEDLTL-VSS-AEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV-TLTNDEHGVAHMMKHLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74216 for 2253 contacts (-32.9/contact) +
2D Compatibility (PS) -27493 + (NN) -6189 + (LL) 1128
1D Compatibility (HY) -7600 + (ID) 3750
Total energy: -118120.0 ( -52.43 by residue)
QMean score : 0.435
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