Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MGSKATFHIGTIIKTHYLFNFFRKQGI--VAMTQEEIDQMIEDWIS-NGFPDELKRLIPDEE-------------------------------------
1EJ5 Chain:A ((1-107))
SGFKHVSHVGWDPQNGFDVNN--LDPDLRSLFSRAGISEAQLTDAETSKLIYDFIEDQGGLEAVRQEMRRQGGSGGSQSSEGLVGALMHVMQKRSRAIHSSDEGEDQAG
General information:
TITO was launched using:
RESULT:
Template:
1EJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25088 for 360 contacts (-69.7/contact) +
2D Compatibility (PS) -5941 + (NN) 1158 + (LL) 408
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -33213.0 ( -92.26 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ5-query.scw
PDB file :
Tito_Scwrl_1EJ5.pdb
: