Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKKVTMTISGEMILIEYYGENFPLHPQEWKDYHSFWQEDYIRFHFQTDIGTLTIY-DGNYDLTLLWG----EPVHRIEKLYHQLLTDPIPVMVYGDERFQEAYRTENGQTKNLYLEHVCNVCKEAYEVLFKQINQKERNT |
4HAR Chain:A ((25-122)) | EACVTSWLWS-------------------EGEGAVFYRVDLH----FTNLGTPPLDEDGRWDPALMYNPCGPEPPAHVVRAYNQPAGDVRGVWGKGERTYAEQDFRVGG-------------------TRWHRLLRMPVR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1613 for 491 contacts (3.3/contact) +
2D Compatibility (PS) -10238 + (NN) -3121 + (LL) 3292
1D Compatibility (HY) 0 + (ID) 1000
Total energy: -9454.0 ( -19.25 by residue)
QMean score : 0.008
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