Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDVSSSPNITFMLQYTEANPQYVDYTNREEAVKIDEELSLETNRQMIEGLTEDELTRIQEAVPETQLNFREYIDYMNRSYATEEQSKELTAIFTQEADYLQKLRLIDLKNKLESAYQNGSLLWQGVISFDNAFLAEQG--LYDVATGQVDQKAIKAVMRDMMPTLIQKEGLSDSAFWWGNIHLNTDNIHIHFGLSEVESNREKIFYQPRGRMEYKGNFSQKTINRFKSGVYHGLLKEETRSNLLRKEQILANLKADFITSIYQKDKITSSAEKNFLEQAYNHLPLNKKWRYGSNARDFAVSKFFLDRYLDSYLNNEGSAAYQEFLKETRDFLQTYEGVYSAEKNKIYEKLRKVDGQTIRTLAESKGYDLEHHLARRVMDLRERLANNILRSFREAAPQIQDVQLEKNLESFSVLNQKKILEQHPEASVVKSQKAWQKLGYFVKAGEQPLEIIRPVYKSYDKHGKGIGRPEFVSDTVYDISQLTENIQLKSLTLKDLSLFSSNELKELVDAAKLKTNPTERERRELGTYRYALKLSILESSQKELQVRQKLLEQVQPLASDQPFLDFKKQLIAQELQAIALQLTPNYKLSEDDKALKNRLKRQFEDSVALPVSKATPGAIQLPIRQLWTELGLVHHIQDENILTLLKGTSTTKQAYIEELQTHISIFQLKYQINNRNKQISQLSDEATIKEMRIANAKGFSELKRLYDTLQPSDDGQNQISQAVSKQLQERKVIKKAQLQQTQRSGKINTDFMRQLTASLNRSQQASKKALMERARSDEREEQEERRQAQR |
1URN Chain:A ((1-78)) | ------------------------------------------------------------AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF-----VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1362 for 473 contacts (2.9/contact) +
2D Compatibility (PS) -7629 + (NN) 2034 + (LL) 52152
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: 42569.0 ( 90.00 by residue)
QMean score : 0.232
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