Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYG-HFQLKKVAICHLEGKQAVSEGE-VFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQ-----------IPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMG-------FLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKKENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
| 4XB6 Chain:C ((1-353)) | -MYVAVKGGEKAIDAAHALQESRRRGDTDLPELS---------VAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTGMRLERRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNHPFAGEIRSG-YIDVSIVPEELGFAVNVGELLMTECEMVNGFIDPPGEPPHFTRGYGLVF--GMSERKAMAMALVDRALQAPEYG-------EHATGPAQDEEFVLAHADNVEVAGFVSHLKLPHYVDFQAELELLKRLQQEQNH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53642 for 2231 contacts (24.0/contact) +
2D Compatibility (PS) -33919 + (NN) 2536 + (LL) 2400
1D Compatibility (HY) -400 + (ID) 2400
Total energy: 21859.0 ( 9.80 by residue)
QMean score : 0.025
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