Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGE-TLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
1I8F Chain:A ((14-49))
---------------------------------------------------------------------------------------------ATLQDSIGKQVLVKLRD----SHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTMVVRGENVLFI
General information:
TITO was launched using:
RESULT:
Template:
1I8F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20198 for 158 contacts (-127.8/contact) +
2D Compatibility (PS) -3587 + (NN) 630 + (LL) 6612
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -19043.0 ( -120.53 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1I8F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I8F-query.scw
PDB file :
Tito_Scwrl_1I8F.pdb
: