Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFAKEYPTTVLLVSLTTLVFLLMQLTYGSQAESSQVIFQFGGIQGDYLKAYPTNLWRLISPIFVHIGWEHFLLNGLALYFVGQMGESIWGSLRFLILYILSGLMGNIFTLFFTPHVVAAGASTSLFGVFSAIAIAGYFGKN--PYLKQVGKSYQVMILLNLFFNIFTPGVSLAGHVGGLVGGVLVAIFLTKQNGSLLFKTWQSILALMIFIIVSISLIGLSLV
2IC8 Chain:A ((1-182))
----ERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPF--------DPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFG-GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148662 for 1474 contacts (-100.9/contact) +
2D Compatibility (PS) -18005 + (NN) -3323 + (LL) 3932
1D Compatibility (HY) -18000 + (ID) 1600
Total energy: -185658.0 ( -125.96 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_2IC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC8-query.scw
PDB file :
Tito_Scwrl_2IC8.pdb
: