Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQETTKSIFPKGEKNPYGEFFIGQSYLAALAKSPDGNVSVG-NVTFEAGCRNNWHVHLDGYQILLVTEGSGWYQEEGKEAVSLKPGDVIVTDKGVRHWHGAKKDSEFAHIAITA---GKS-EFYEAVSDEKYSKLG
4BIF Chain:B ((42-156))
------------------DWFTGTVRIDPLFQAPDPALVAGASVTFEPGARTAWHTHPLG-QTLIVTAGCGWAQREGGAVEEIHPGDVVWFSPGEKHWHGAAPTTAMTHLAIQERLDGKAVDWMEHVTDEQYRR--
General information:
TITO was launched using:
RESULT:
Template:
4BIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22990 for 773 contacts (-29.7/contact) +
2D Compatibility (PS) -11796 + (NN) -2418 + (LL) 624
1D Compatibility (HY) -5600 + (ID) 2300
Total energy: -44480.0 ( -57.54 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_4BIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BIF-query.scw
PDB file :
Tito_Scwrl_4BIF.pdb
: