Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRVQSFDEMTNISKDFIALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQYYGLSVCVTTQVGCNIGCTFCASGLIKK--QRDLNNGEITAQIMLVQKYFDERGQGERVSHIVVMGIGE-PFD--NYTNVLKFLRTVNDDNGLAIGARHITVSTSGLAH-KIREFANEGVQVNLAVSLHAPNNELRSSIMRINRSFPLEKLFAAIEYYIETTNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLS-YVNLIPYNPVSEHDQYS---RSPKERVEAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAKVGR |
| 3T7V Chain:A ((61-266)) | -------------------------------------------------------------------------------------------------------------LNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKG--------AGFHMVDLTM-GEDPYYYEDPNRFVELVQIVKEELGL-----PIMISPGLMDNATLLKAREKG-ANFLALYQETYDTELYRKLRV---GQSFDGRVNARRFAKQ-QGYCVED--GILTGVGNDIESTILSLRGMST--NDPDMVRVMTFLPQEG-TPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIVTSILPPDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96218 for 1509 contacts (-63.8/contact) +
2D Compatibility (PS) -21528 + (NN) -13611 + (LL) 10096
1D Compatibility (HY) -9600 + (ID) 1550
Total energy: -132411.0 ( -87.75 by residue)
QMean score : 0.495
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