Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MNFSFLPQYWSYFN-YGVMVTIMI---STCVVFFGTIIGVLIALVKRTNLHFLTIL-------ANFYVWV-----FRGTPMVVQIMIAFAWMHFN-NLPTISFGVLDLDFTRLLPG---IIIISLNS----GAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTA---TYSPVAP--LLFAAFYYLMLTTILSALLKQMEKYLGKGVKIDG
4D79 Chain:A ((3-268))VVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTG--------GAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKL--GVDCVFSTEALVYPGFGAATMVTATFGFVAVSHALKKMMAKAAR--------QG


General information:
TITO was launched using:
RESULT:

Template: 4D79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -277298 for 1692 contacts (-163.9/contact) +
2D Compatibility (PS) -23332 + (NN) -6825 + (LL) 1480
1D Compatibility (HY) -3200 + (ID) 1650
Total energy: -310825.0 ( -183.70 by residue)
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_4D79.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D79-query.scw
PDB file : Tito_Scwrl_4D79.pdb: