Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLYPLLTKTRNTYDLGGIWNFKLGEHNPNE---LLP--SDEVMVIPTSFND-LMVS--------KEKRDYIGDFWYEKVIEVPKVSEDEEMVLRFGSVTHQAKIYVDGVLVGEHKGGFTPFEVLVPECKYNNEKIKVSICANNVLDYTTLPVGNYSEIIQEDGSIKKKVRENFDFFNYAGVHRPLKLMIRPKNHIF--DITITSRLSDDL-QSADLHFLVETN-QKVDEVRISVFDEDNKLVG-------ETKDSRLFLSDVHLWEVLNAYLYTARVEIFVDNQLQDVYEENFGLREIEVT-NGQFLLNRKPIYFKGFGKHEDTFINGRGLNEAANLMDLNLLKDIGANSFRTSHYPYSEEMMRLADRMGVLVIDEVPAVGLFQNFNASLDLSPKDNGTWSLMQTKAAHEQAIQELVKRDKNHPSVVMWVVANEPASHEAGAHDYFEPLVKLYKDLDPQKRPVTLVNILMATPDRDQVMDLVDVVCLNRYYGWYVDHGDLTNAEVGLRKELLEWQDKFPDKPIIITEYGADTLPGLH----S------TW-----------------NIPYTE-----EFQCDFYEMSHRVF--------DGIPNLVGEQVWNFADFETNLMILRVQGNHKGLFSRNRQPKQVVKEFKKRWMTIPHYHNKKNSVK |
| 3GM8 Chain:A ((4-609)) | ---------GETINFCKGWKFHLGDAGKGASSSSYNDSQWRILNIPHDWSIEGTYKQFENGTDWQSGFLPAGISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWINGHWLGKRPNGYISFVYDLTPYLQEG-KNQIAVKVDHSKAL------------------------TGRWYTGSGIYRPVYLLVSNPTHIPYSGIHFRSKLQNKQSATYTLSIEIETQEKKPIKVKTYLQAPNGSIADTSEKIFV-LCFLSGSIRKPLLWSPDSPNVYTLICQLTRDNKILDECRLPVGFRQLEFNPVSGFLLNGKSLKIKGVCDHHTVGAVGAAVPDDLLHYRLKLLKDMGCNAIRTSHNPFSPAFYNLCDTMGIMVLNEGLDGWNQPKA----------ADD-YGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTGAT---PEIQHNLVSLFHQLDP-DRPVTQGGTDP---------NYLDIIGFNGNGEEIG----------EL----EHFHKNYPTLCAIATEVPHTYQTRGVYRSQTQWRRRDFPAPWEFKHRVFPIPDLTEKECFPEESDYPYYQSSYDNASVRISARKSWQRTCSFPWLMGEFRWGSFDYLGEAEW-PQRCGNFGIIDIAAIPKDAYFLYQSLWTDKPMVHLLPHWTH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162782 for 4282 contacts (-38.0/contact) +
2D Compatibility (PS) -55138 + (NN) -10768 + (LL) 4436
1D Compatibility (HY) -18400 + (ID) 5700
Total energy: -248352.0 ( -58.00 by residue)
QMean score : 0.453
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