Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNVKKRPEVLSPAGTLEKLKVAIDYGADAVFVGGQAYGLRSRAGNFSMEELQEGINYAHARDAKVYVAANMVTHEGNELGAGPWFRELRDMGLDAVIVSD-----PALIVICATEAPGLEIHLSTQASSTNYETFEFWKEMGLTRVVLAREVTMAELAEIRKRTDVEIEAFVHGAMCISYSGRCVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERQSLKGEIPEPFSMSAVDMCMIEHIPDMIENGVDSLKIEGRMKSIHYVSTVTNCYKAAVDAYMESPEAFEAIKEDLIDELWKVAQRELATGFYYHTPTENEQLFGARRKIPQYKFVGEVVSFDNAKMEATIRQRNVIMEGDRVEFYGPGFRHFECFIDGLRDAEGNKIDRAPNPMELLTITLPNPVKKGDMIRACKEGLVNLYQNDGTSKTVRA |
1WA3 Chain:A ((71-183)) | --------------TSVEQCRKAVESGAEFIVSPHLD---------------EEISQFCKEKGVFYMPGVMT---PTE-------LVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNL---DNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73573 for 753 contacts (-97.7/contact) +
2D Compatibility (PS) -11682 + (NN) -3561 + (LL) 19520
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -72646.0 ( -96.48 by residue)
QMean score : 0.504
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