Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNYRKLIVLLLLTFFVIFMGAYAYTHIVEKRSLTSNTIEKTLPVVNQIKPQTIKEYQNYLTKVAKRNVLPVDIPQALNNEKVEITATDGMQTFTWNDKNNPKQKVIFYVHGGSYIHQASELQYIFVNKLAKKLDAKVVFPIYPKAPTYNYSDAIPKIKKLYQNTLAS-VTSPKQIILVGESAGGGLALGLADNLVTEHIKQPKEIILISPWLDIATNNPKIEKVQKKDPLLKAWQLQQVAPYWANGKKNFKNPQVSPLYSSQFNKMAPISFFIGTHDIFYPDNQLLHQKLAKENIKHHYIVGQKMNHVYPVLP--IPEAETAFKQMLKIINH
3FAK Chain:A ((56-306))-------------------------------------------------------------------------------DIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFK-PQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARYLN-GADAKHPYASPNFA-NLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMRE


General information:
TITO was launched using:
RESULT:

Template: 3FAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122594 for 2323 contacts (-52.8/contact) +
2D Compatibility (PS) -26519 + (NN) -15889 + (LL) 7012
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -171540.0 ( -73.84 by residue)
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_3FAK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FAK-query.scw
PDB file : Tito_Scwrl_3FAK.pdb: