Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLFLIMMERAGLIILLAYAFVHIPFIKQTLKQPELKKHQYILLILFSLFAIISNFTGVEIQSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQGGLAPHIYVISSLLIGLCSGLSGNYLRKNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQALRLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTTESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSVATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFSTQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRMDSEKARKLVQDFSKVIRANLQRAKQNLIPLHDELEQVNAYLALEEARFPNMVAFNLDNQTNSDDNLM-IPP--FTLQVLIENSYKHAFKHV--------NKNNQLKVTIARNNDRLHIIVQDNGIGIPKEK------------------------LITLGKKTQISKQGSGTAIENLVRRLNIIYDGQASLKFESN-DSGTCAIVNIPIKN |
1B3Q Chain:A ((62-248)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGED-TELDRTFVEEIGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS-----GVGMDVVKNVVESLNG---SMGIESEKDKGTKVTIRLPLTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43852 for 1013 contacts (-43.3/contact) +
2D Compatibility (PS) -14967 + (NN) -6367 + (LL) 35892
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -37444.0 ( -36.96 by residue)
QMean score : 0.481
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