Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTHINITLDMGETSKD-LRIPLKISVKQLVMELDSIFSRTERRTKYQLRVINKGILLGENDILAHHPVTTGDRIRIEEFY
1WGG Chain:A ((6-76))
--SGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQ--PARQKVM--VKGGTLKD-DDWGNIKMKNGMTVLMMGSA
General information:
TITO was launched using:
RESULT:
Template:
1WGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44455 for 461 contacts (-96.4/contact) +
2D Compatibility (PS) -7105 + (NN) -209 + (LL) 648
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -53521.0 ( -116.10 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1WGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WGG-query.scw
PDB file :
Tito_Scwrl_1WGG.pdb
: