Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYG-------KTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSL--H-K-AHDYEEVLEELKSWLIDK-SSSKE------PL-VQPTL--SSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKSPNLMVAAFVVIADTSEEAENIAKTLDIWMLGN-KDFN------EFATFPTIEEANH--YQLTPEQK---AKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1NQK Chain:A ((3-345)) | LNMFWFLPT-HGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRS-----CEDAWLVAASMIPVTQRLKFLVA-LRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQ-ELAGDGVFLDHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAKLLFPAIQQPYPPLYFGGSSDVAQELAAEQVDLYLTWG-E--PPE---LVKEKIEQVRAKAAAHGR--KIRFGIRLHVIVRETNDEAWQAAERLISHLDDETIAKAQAAFAR-------------DNLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYAA-LGIDSFVLSGYP-----HLEEAYRVGELL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127364 for 2419 contacts (-52.7/contact) +
2D Compatibility (PS) -31104 + (NN) -8125 + (LL) 2164
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: -169729.0 ( -70.16 by residue)
QMean score : 0.480
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