Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYLDNAATTALTPSVIEKMTNVMTSNYGNPSSIHTFGRQANQLLRECRQIIAEYLNVNSREIIFTSGGTESNNTAIKGYAL---ANQ--LKG--KHIITSEIEHHSVLHTMTYLSERFGFDITYLKPNH--GQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLR--NHQAV--------FHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYC------APHHFDSLLHGGDQEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQLRTTFLDAISDLDF-----YLNN---GQDCLPHVLN--IGFPRQNNGLLLTQLDLAGFAVSTGSACTAGTVEPSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD |
| 3GZD Chain:B ((27-433)) | -VYMDYNATTPLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIGGKPQDIIFTSGGTESNNLVIHSVVKHFHANQTS--GAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIRGLGEFTPLY--PMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVR-DYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRV--LMASVG--------QPSPVLLS-YGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162563 for 3080 contacts (-52.8/contact) +
2D Compatibility (PS) -37817 + (NN) -11604 + (LL) 972
1D Compatibility (HY) -18800 + (ID) 6650
Total energy: -236462.0 ( -76.77 by residue)
QMean score : 0.470
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