Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANIGP-----GFDSIGVALSKYLSIEVLE-ESTEWLVEH-N--L----------VN----I---PKDHTNLLIQTALHVKSD-LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLEG--------HPDNVAPAIFGDL---VISSIVKNDIKSLEVMFPDSSFIAFIPNYELKTSDS-RNVLPQKLS-------Y--------------------------EDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQ---PLVKEFGVIKQISTQN-GAYATYLSGAG--PTVMVLCSKEKEQPIVTELSK-LCLDGQIQVLNIERKGVRVEKR |
| 1WUU Chain:A ((37-397)) | LAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEGADEPQRLQFPLPTAQRSLEPGTPRWANYVKGVIQYYPAAPLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPCGIM-DQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSNVRH--ASSEYPVRRRQCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIRRTAQAAAALRRGDYRAFGRLMVES--HRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMTGGGFGGCTVTLLEASAAPHAMRHIQEHYGGTATFYLSQA-ADGAKVLCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147950 for 2415 contacts (-61.3/contact) +
2D Compatibility (PS) -29684 + (NN) -1746 + (LL) 452
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -184978.0 ( -76.60 by residue)
QMean score : 0.443
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