Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFNLEQVKVFENYEIENWEEGQVTLTTKVVDSSLNYYGNAHGGYLFTLCDQVSGLVAISTGYEAVTLQSNINYLRAGRLDDLLTVIGTCVHNGRTTKVVDVHIKNQKGEMVTTAIFTMFVTGERKEK
3LBE Chain:B ((39-161))
---HLHEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTGKRK--
General information:
TITO was launched using:
RESULT:
Template:
3LBE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69609 for 935 contacts (-74.4/contact) +
2D Compatibility (PS) -13193 + (NN) -1092 + (LL) 572
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -102822.0 ( -109.97 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3LBE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LBE-query.scw
PDB file :
Tito_Scwrl_3LBE.pdb
: