Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------METNIYGDYGRY-----LPLILEDFSQRIQLENDKAKVETGYK-----LYEHIIGRIKTSDSMIEKCRRKQLP-----VTVDSALKAIRDSIGVRIICGFVNDIYQIVERI----KSFDDCRIVVEKDYIQHVKPNGYRSYH-----VILEIDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE--------------------------------------------- |
| 2OI2 Chain:A ((4-292)) | KVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAESPWRLYEEDTLSMAVYASLEYLNITEACIRCEIDEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKNVGFTELEMDLSAYLVIADTGVYGHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41374 for 1445 contacts (-28.6/contact) +
2D Compatibility (PS) -21327 + (NN) -338 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -68939.0 ( -47.71 by residue)
QMean score : 0.239
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