Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTDSKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-Q-----LKAA----NSYVTGPLFLSVGDTLFGKSGE--DAKGTNWGNEAGVSVLKWIADQKKNDGFVNL-TAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAY-LTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 2GHA Chain:A ((3-369)) | -------------------------------------PKLTIWCSEKQVDILQKLGEEFKAKY-GVEVEVQYVNFQDIKSKFLTAAPEGQGADIIVGAHDWVGELAVNGLIEPIPNFSD---LKNFYETALNAFSYGGKLYGIPYAMEAIALIYNKDYVPE-PPKTMDELIEIAKQIDEEFGGEVRGFITSAAEFYYIAPFIFGYGGYVFKQTEKGLDVNDIGLANEGAIKGVKLLKRLVDEGILDPSDNYQIMDSMFREGQAAMIINGPWAIKAYKDA-G-IDYGVAPIPDLEPG-VP--ARPFVGVQGFMVNAKSP-----NKLLAIEFLTSFIAKKETMYRIYLGDPRLPSRKDVLELV--KDNPDVVGFTLS---AANGIPMPNVPQMAAVWAAMNDALNLVVNGKATVEEALKNAVERIKAQIQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18588 for 3073 contacts (-6.0/contact) +
2D Compatibility (PS) -37474 + (NN) -10229 + (LL) 3508
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -82733.0 ( -26.92 by residue)
QMean score : 0.390
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