Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQISF---HEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIPVVSIPGASAGITALIASGLAP------QPHIFYGFLPRKKGQQITFFETKKDYPETQIFYESPFRVSDTLKHMKEI-YG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 1PJQ Chain:A ((210-448)) | -------EPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDR-LVSDDIMNLVRRDADRVFVGKRHCVPQEEINQILLREAQKGKRVVRLK-GGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVT------G--ELDWENLAAEKQTLVFYMGLNQAATIQEKLIAFGMQADMPVALVENGTSVKQRVVHGVLTQLGELAQ--QVESPALIIVGRVVALRDKLNWFSNH---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114196 for 1793 contacts (-63.7/contact) +
2D Compatibility (PS) -23910 + (NN) -11747 + (LL) 4488
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -154565.0 ( -86.20 by residue)
QMean score : 0.448
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