Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDIVKDIKNHYL--GKVDAIFHNGDSELPSSDPI---W-EGIHVVTGNCDYDSG--------YP------EVLVTKIDNTVIVQTHGHLHQINFTWDKLDLLAQQEDADICLYGHLHRADAWKNGKTIFINPGSVLQPRGPINEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
1S3L Chain:A ((26-189))
---MKIGIMSDTHDHLPNIRKAIE-IFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERCKLKEWLKDINEENIIDDFISVEIDDLKFFITHGHHQSV------LEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCGYLTG--IPTIGILDTEKKEYREIVL----------------
General information:
TITO was launched using:
RESULT:
Template:
1S3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73692 for 1155 contacts (-63.8/contact) +
2D Compatibility (PS) -16279 + (NN) -9043 + (LL) 1732
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -104732.0 ( -90.68 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1S3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3L-query.scw
PDB file :
Tito_Scwrl_1S3L.pdb
: