Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGI---PLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGG-----DLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY |
2EMQ Chain:A ((10-141)) | -------------------------------------------------------------------------QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHP--FVCVENDDG------YFAGIFTRREVLKQLNKQLHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67566 for 892 contacts (-75.7/contact) +
2D Compatibility (PS) -13322 + (NN) -2627 + (LL) 6632
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -84383.0 ( -94.60 by residue)
QMean score : 0.447
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