Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILVLHTGGTISMNANE-KGQVMS--SADNPMKYVD-LSLDDLDLTVVDFLNLPSPQITPHHMLDIYHYLKQH-ASNFDGVVITHGTDTLEETAYFLDTMILPKIPIIITGAMRSTNELGSDGVYNYLSALRVANSTKAADKGVLVVMND-------EIHAAKYVTKTHTTNVSTFQTPTHGPLGIIMKQDLLFFKATEERVR---FD-LDKITGTVPIVKAYAGMGDSGIISFLNSQNISGLVIEALGAGNMPPKAAQEIEELIEQGVPVVLVSRCFNGIAE-PVYGYEGGGARLQESGVMFVKELNAPKARLKLLIALNAGLTGQNLKDYIEG |
| 2D6F Chain:A ((90-418)) | LPDVSIISTGGTVASIIDYRTGAVHPAFTADDLLRANPELLDI-ANIRGRAVFNILSENMKPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLRTPVPVVFTGAQRSSDRPSSDASLNIQCSVRAATSE---IAEVTVCMHATMDDLSCHLHRGVKVRKMHTSRRDTFRSMNALPLAEVTPDGIKILEENYRKRGSDELELSDRVEERVAFIKSYPGISPDIIKWHLDEG-YRGIVIEGTGLGHCPDTLIPVIGEAHDMGVPVAMTSQCLNGRVNMNVYS---TGRRLLQAGVIPCDDMLPEVAYVKMCWVLGQTDDPEMAREMMRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222558 for 2774 contacts (-80.2/contact) +
2D Compatibility (PS) -34146 + (NN) -12844 + (LL) 220
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -287828.0 ( -103.76 by residue)
QMean score : 0.514
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