Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIENYCQDYCLETIFPKHYFKDLQVITLTAGQSVCKQGEQLEYLHYIVKGRFKIVRRLFNGKEHILDIKTKPTLIGDIELLTNRQIVSSVIALEDLTVIQLSLKGRKEKLLTDATFLLKLSQELAQAFHDQNIKASTNLGYTVKELLASHILAIEEQG--YFQLELSSLADSFGVSYRHLLRVIHDMVKEGLIQKEKPKYFIKNRFALESLNIQP
3FX3 Chain:A ((21-228))
----------SLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDC-EVTLPYDKMLIAGRLGMKPESLSRAFSRLKAAGVTV-KRNHAEIEDIALLRDYAES-
General information:
TITO was launched using:
RESULT:
Template:
3FX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86805 for 1418 contacts (-61.2/contact) +
2D Compatibility (PS) -21607 + (NN) -5533 + (LL) 396
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -120199.0 ( -84.77 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3FX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FX3-query.scw
PDB file :
Tito_Scwrl_3FX3.pdb
: