Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVN--ALKKLFDLAEHIFREKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQ-GLHYHWTWAYNHIGYSKYHEGVAILSLKPL-KP-EDILVSAVDD--ETDYHTRRALVAETTLN---DKVVTVVSLHLSWFEKGFAEEWKRLETTLLE-----VETPLLLMGDFNNPTGNQ---GYELVLN---SPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLS-----ISSSQVVF-------EGGEAPVVSDHYGLEITMDF |
| 2A40 Chain:B ((1-260)) | -LKIAAFNIRTFGETKMSNATLASYIVRI--VRRYDIVLIQEVRDSHLVAV----------------------GKLLDYLNQDDPNTYHYVVSEP-LGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPS--DAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSST--FQ----WLI-PDSADTTA--------TSTNCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87160 for 1850 contacts (-47.1/contact) +
2D Compatibility (PS) -24551 + (NN) -5758 + (LL) 2004
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -125515.0 ( -67.85 by residue)
QMean score : 0.376
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