Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKVGLMGVMADTVIANGGYTT--GVIPTFL--RDREIAHENLSE-------------LIIVNNMPERKAKMML-------LGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY
5AJT Chain:C ((61-262))
-KICVFCGSSGGASPAHMEAARQLGRVMAENNIDLVYGGGTVGLMGEVARTVCSINGPESVHGIIPEALVRYERDGTYQTVKDNKQVVPTETVYGRTTVVKDMHTRK-KMMAEEVISGGPGSGFIGLSGGYGTMEEVFEVITWNQLGIHTKGICLLNVEGYWDGILQWINMAAAQGFVQPGNETIVVSAGDAEGAVRALREYKVSEATFK
General information:
TITO was launched using:
RESULT:
Template:
5AJT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123083 for 1354 contacts (-90.9/contact) +
2D Compatibility (PS) -19935 + (NN) -9187 + (LL) 352
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -168353.0 ( -124.34 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_5AJT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AJT-query.scw
PDB file :
Tito_Scwrl_5AJT.pdb
: