Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITKMVISSVLATVLMTACSQSSQNGQSDVKHIGILQYVEHPSLTATRKGFIKELAKEGYKDGKNIKIEYKNAQGDQSNIQSISEKLIKD-NKLVLGIATPAAQSLTTVSTETPILFTAVTDPVSAELVKSMKKPEGLATGTSDMSPIKKQVSLLRKVMPKVKRVGIMYTTSE-RNSEVQVKQAKKIFQEAGIKTSV--K--GI------SSTNDVQDTAKSLMS-KTEVIFVPTDNIIASSVTLLGNLSKE--LKVPVVGGSADMVP---SGLLFSYGADYEALGRQTARQAVKILKGKDVAKVPSEYPQNLKVVVNEDMAKELGIDVSSIKNNK |
2QU7 Chain:A ((7-261)) | ------------------------------RSNIIAFIVPDQNPFFTEVLTEISHECQKHHLH------VAVASSEENEDKQQDLIETFVSQNVSAIILVPVKSKFQMKREWLKIPIMTLDRE-LES---------TSLPSITVDNEEAAYIATKRVLES--TCKEVGLLLANPNISTTIGRKNGYNKAISEFDLNVNPSLIHYSDQQLGTNAQIYSGYEATKTLLSKGIKGIVATNHLLLLGALQAIKESEKEIKKDVIIVGFDDSYWNEIYTPKLTVISQPVKEMGQVAAKMIYKLIKGKDVTSIKLSTKLIIRESCSFN---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QU7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63028 for 1928 contacts (-32.7/contact) +
2D Compatibility (PS) -25480 + (NN) -10959 + (LL) 4912
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -102955.0 ( -53.40 by residue)
QMean score : 0.516
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