Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEESGNFGFDRLAELVKE------YKVDKFVVGLPKNMNNTSG---PRV-E-ASQAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
3VOV Chain:A ((1-114))
MKVVGLDLGGTKIAAGVFDG-KRL-LSKVVVPTPKEGGERVAEALAEAAERAEREAGVRGEAIGLGTPGPLDFRRGVIR-NIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGE
General information:
TITO was launched using:
RESULT:
Template:
3VOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47515 for 690 contacts (-68.9/contact) +
2D Compatibility (PS) -10725 + (NN) -2813 + (LL) 180
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -62973.0 ( -91.27 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3VOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VOV-query.scw
PDB file :
Tito_Scwrl_3VOV.pdb
: