Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTLITTFQERFGDWTQSLIEHLQLSLLTLILATLIAIPLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIGTVPAVVALIIYALFPILQNTVTVLMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTATLASLIGAGGLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLIGLLEKARLRTIAVSGILLLAGLGLSYAPKWMPGTNTATITVAGKLGTEPDILINMYKELIEDQTDIKVKLKPNFGKTTFLYQALKSGDIDLYPEFTGTITSSLLKNPPKVSNNPKQVYNLAKNGILKQDKLSLLSPMAYQNTYAVAVKKDYAEANQLKNISDLKKL-DKLKAGFTLEFKDREDGSIGLQKHYGLNLD-ISTLEPALRYQAINSKDVNIIDAYSTDSELIQYQLQILKDDKHLFPPYQGAPLLRQDTIKKYPQVKKALNKLAGHITEKEMQEMNYQVAVKHKSAATVAKQYLKAHHIIK
1SW5 Chain:A ((6-275))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERVVIGSKPFNEQYILANMIAILLEEN-GYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFASRPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTA-KDEKLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQGLVK


General information:
TITO was launched using:
RESULT:

Template: 1SW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63309 for 2223 contacts (-28.5/contact) +
2D Compatibility (PS) -28671 + (NN) -7379 + (LL) 20868
1D Compatibility (HY) -23600 + (ID) 4600
Total energy: -106691.0 ( -47.99 by residue)
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_1SW5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SW5-query.scw
PDB file : Tito_Scwrl_1SW5.pdb: