Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYTIEELVEQANSQHKGNI-----AELMIQTEIEMT------GRSREEIRYIMSRN-LEVMKASVIDGLTPSKSISGLTGGDAVKMDQYLQSGKTISDTTI-------LAAVRNAMAVNELNAKM-GLVCATPTAGSAGCLPAVISTA-IEKLNLTE-------EEQLDFLFT------------------AGAFGLVIGNNASISGAEG-GCQAEVGSASAMAAAALVMAAGGTPFQASQAIAFVIK--------NMLGLICDPVAGLVEVPCVKRNALG--SSFALVAADMALAGIESQIPVDEVIDAMYQVG-S-SL-PTAFRETAEGGLAATPTG-RRYSKEIFGE- |
| 2GSZ Chain:A ((1-349)) | -ELKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSFG-VRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVT---GPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQQVYSL-----MQMQTMNQTLYKLYKQGLITLEDAMEASPDPKELER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89481 for 1947 contacts (-46.0/contact) +
2D Compatibility (PS) -29565 + (NN) -4751 + (LL) 532
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -131215.0 ( -67.39 by residue)
QMean score : 0.290
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