Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMPAAETQPKKKRMTFKMPDAYVLLFMIAFICAIASYIVPAGEFDRVTKGDVTTAVPGSYHSIEQSPVRLISFFTSLQDGMVGSAPIIFLILFTGGT-----------IAILEKTGAINGL--------------IYNVISKFRTKQLLFICIVGALF--SILGTTGIVVNSVIGFIPIGLIVARSLKWDAVAGAAVIYIGCYAGFNSTILSPSPLGLSQSIAELPL-------FSGIGLRVVIYICFL----LSSIIYIYLYTRKLK-KSKDASVLGTDWFPAAGMGEAGKEED--------------QSVPFTVRHKLILAVAGLSLVGFLYGALKLGWSDSQMAATFIFISVLAGLIGGLAANDIAKTFITGC---------------QSLVY-------GALIVGMARSISVILENGKLLDTVVNALASLLDGFSPIAGAIGMY--IASALLHFLISSGSGEAVVFIPILAPLADLMGITRQVAVEAVMLG-------EGVVNCVNPTSGVLMAVLAASGIPYVKWLRFMVPLALIWFLIGLVFIVIGVMINWGPF----------------
4XGC Chain:C ((1-676))MQPFYEEYRKAWNQINDHIADLQHRSYARTLE-QLVDFVVGQAERDEVLP---TAALLTGINQPDH-----LSQFTALTQRLHAQRAAMVCVLQSRDCATLKAAVETLVFGLVEDNAEVEQLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKLPQLLRDCLLHFLLFRCSLEFLTELVGDLPRCPLGKLRRELYVNCLNRAIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEIAPLELGEACTAVLRPKLEAIRLAVDEVGRALQKTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNIIGAPRAALHTALNNPHFPDLSVVYKLHLECG-RMINLFDWLQAFRSVVPQIQARFTRAVAELQFLGYIKMSKRKTDHATRLTW


General information:
TITO was launched using:
RESULT:

Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1776 -327215 -184.24 -700.67
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : -184.24
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.148

(partial model without unconserved sides chains):
PDB file : Tito_4XGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGC-query.scw
PDB file : Tito_Scwrl_4XGC.pdb: