Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQ------DSYDKQMKQLFNK---YSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
5B0O Chain:E ((5-139))--------------------------------------------------------------------------------------------------------PIHARMQQLVSEFQNTLDALDSVIASRLMQMALEAARQVIGQTPAVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQR--------VEEMLGATLSLHGWRLRGDP-------TLHHGGCKVSADEG------DLDASVATRWQELCRLAAPGV----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5B0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 357 -35459 -99.32 -281.42
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain E : 0.56

3D Compatibility (PKB) : -99.32
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.013

(partial model without unconserved sides chains):
PDB file : Tito_5B0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5B0O-query.scw
PDB file : Tito_Scwrl_5B0O.pdb: