Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVLKMPKDVEFQQ--YEPIPGWKVSTQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTDEHGATKTEDDSENSGSSALDITAMVLSA-AAIILSVAALVKKKRA-
4O6Y Chain:A ((10-219))PIFMVVRVLGFIIAALVLTWTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYS-----LHSWLGLACLFLFAFQWAAGFVTY----WYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYSTEAMLVNTMGVLILILGGFVILGVVT


General information:
TITO was launched using:
RESULT:

Template: 4O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 697 -58410 -83.80 -299.54
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -83.80
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.59
QMean score : -0.079

(partial model without unconserved sides chains):
PDB file : Tito_4O6Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O6Y-query.scw
PDB file : Tito_Scwrl_4O6Y.pdb: