Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYGIGLDITELKRIASMAGRQKRFAERILTRSELDQYYELS-EKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNGKPYIICTKLSQAAVHVSITHTKEYAAAQVVIERLSS
5CXD Chain:C ((4-119))MIHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDIDCYNDELGKPKI---DYEGFIVHVSISHTEHYAMSQVVLEK---


General information:
TITO was launched using:
RESULT:

Template: 5CXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 473 -61375 -129.76 -533.70
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain C : 0.86

3D Compatibility (PKB) : -129.76
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_5CXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CXD-query.scw
PDB file : Tito_Scwrl_5CXD.pdb: